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  • Logit function and table of specificity/sensitivity for specific probability cutoffs.

    Hi I have been using using the logit function to combine biomarkers and determine AUC’s for certain combinations. However, I can’t seem to figure out how to find specific sensitivity and specificity values for certain probability cutoff. I have used “lsens” which will graph the values. Is there any way to get a organized table of these values?

    If there’s another way or better way also to combine biomarkers please let me know as well.

    Thanks for the help.

  • #2
    assuming that by "logit function" you mean that you are estimating a logit regression using the logit command, what you want is "estat classification" with the cutoff option; type

    Code:
    help estat classification

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    • #3
      Do you mean this:
      Code:
      use auto
      logit foreign price weight
      estat classif 
      estat classif, cutoff(0.7)
      The default cut-off is 0.5. But you can use other probability cut-offs using the option cutoff.

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      • #4
        Oh yes I have been using that, I was just wondering if there is a way to generate a table of different cutoffs, similar to how they generate the lsens graph

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